STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HikeshiHeat shock protein nuclear import factor hikeshi. (132 aa)    
Predicted Functional Partners:
nup155
Nucleoporin 155.
     
 0.744
nup35
Nucleoporin 35.
     
 0.724
hspa9
Heat shock protein 9; Belongs to the heat shock protein 70 family.
   
 0.708
hspa5
Heat shock protein 5; Belongs to the heat shock protein 70 family.
   
 0.703
ENSPREP00000032333
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
     
 0.702
nup85
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
     
 0.698
LOC103471205
Heat shock protein 4b.
   
 0.692
LOC103475404
Heat shock protein 4a.
   
 0.692
nup98
Nucleoporin 98.
     
 0.688
LOC103461037
RAN binding protein 2.
   
 
 0.671
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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