LOC103475319 protein (Poecilia reticulata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

LOC103475319

Somatostatin domain-containing protein. (121 aa)

Predicted Functional Partners:

LOC103467230

0.971

LOC103475296

0.957

LOC103480475

0.900

LOC103479325

0.650

LOC103465715

0.650

LOC103482062

0.650

ENSPREP00000000780

0.650

LOC103469309

0.650

LOC103468864

0.650

LOC103469447

0.650

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPREP00000000780	LOC103467230	ENSPREP00000000780	ENSPREP00000024043	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Cortistatin.	0.657
ENSPREP00000000780	LOC103475296	ENSPREP00000000780	ENSPREP00000004434	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Somatostatin.	0.679
ENSPREP00000000780	LOC103475319	ENSPREP00000000780	ENSPREP00000004453	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Somatostatin domain-containing protein.	0.650
ENSPREP00000000780	LOC103480475	ENSPREP00000000780	ENSPREP00000018737	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Somatostatin domain-containing protein.	0.650
LOC103465715	LOC103467230	ENSPREP00000000545	ENSPREP00000024043	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Cortistatin.	0.812
LOC103465715	LOC103475296	ENSPREP00000000545	ENSPREP00000004434	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Somatostatin.	0.918
LOC103465715	LOC103475319	ENSPREP00000000545	ENSPREP00000004453	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Somatostatin domain-containing protein.	0.650
LOC103465715	LOC103480475	ENSPREP00000000545	ENSPREP00000018737	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Somatostatin domain-containing protein.	0.650
LOC103467230	ENSPREP00000000780	ENSPREP00000024043	ENSPREP00000000780	Cortistatin.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.657
LOC103467230	LOC103465715	ENSPREP00000024043	ENSPREP00000000545	Cortistatin.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.812
LOC103467230	LOC103468864	ENSPREP00000024043	ENSPREP00000002803	Cortistatin.	Somatostatin receptor 2b; Belongs to the G-protein coupled receptor 1 family.	0.812
LOC103467230	LOC103469309	ENSPREP00000024043	ENSPREP00000001211	Cortistatin.	Somatostatin receptor 5; Belongs to the G-protein coupled receptor 1 family.	0.812
LOC103467230	LOC103469447	ENSPREP00000024043	ENSPREP00000018821	Cortistatin.	Somatostatin receptor 3; Belongs to the G-protein coupled receptor 1 family.	0.812
LOC103467230	LOC103475296	ENSPREP00000024043	ENSPREP00000004434	Cortistatin.	Somatostatin.	0.980
LOC103467230	LOC103475319	ENSPREP00000024043	ENSPREP00000004453	Cortistatin.	Somatostatin domain-containing protein.	0.971
LOC103467230	LOC103479325	ENSPREP00000024043	ENSPREP00000000208	Cortistatin.	Si:zfos-169g10.2; Belongs to the G-protein coupled receptor 1 family.	0.812
LOC103467230	LOC103480475	ENSPREP00000024043	ENSPREP00000018737	Cortistatin.	Somatostatin domain-containing protein.	0.900
LOC103467230	LOC103482062	ENSPREP00000024043	ENSPREP00000000766	Cortistatin.	Somatostatin receptor 2a; Belongs to the G-protein coupled receptor 1 family.	0.812
LOC103468864	LOC103467230	ENSPREP00000002803	ENSPREP00000024043	Somatostatin receptor 2b; Belongs to the G-protein coupled receptor 1 family.	Cortistatin.	0.812
LOC103468864	LOC103475296	ENSPREP00000002803	ENSPREP00000004434	Somatostatin receptor 2b; Belongs to the G-protein coupled receptor 1 family.	Somatostatin.	0.918