STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000004459Uncharacterized protein. (181 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.731
rsad2
Radical S-adenosyl methionine domain containing 2.
   
 0.651
pex26
Ubiquitin specific peptidase 18; Belongs to the peptidase C19 family.
   
 0.631
ifih1
Interferon induced with helicase C domain 1.
   
 0.591
bbs9
Bardet-Biedl syndrome 9.
    
 0.554
bbs7
Bardet-Biedl syndrome 7.
    
 0.537
ints13
Integrator complex subunit 13.
   
 0.534
ints1
Integrator complex subunit 1.
    
 0.529
ints11
Integrator complex subunit 11.
   
 0.514
tep1
Uncharacterized protein.
    
 0.503
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.