STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
myotMyotilin. (462 aa)    
Predicted Functional Partners:
MYOZ1
Myozenin 1.
   
  
 0.967
neb
Nebulin.
   
  
 0.954
pkd1
Polycystic kidney disease 1a.
   
 0.797
ENSPREP00000018298
Uncharacterized protein.
   
  
 0.784
mylpf
Myosin light chain, phosphorylatable, fast skeletal muscle a.
   
  
 0.750
LOC103481362
Myosin light chain, phosphorylatable, fast skeletal muscle b.
   
  
 0.750
bag3
BCL2 associated athanogene 3.
    
 
 0.726
LOC103465645
Troponin I2, fast skeletal type.
   
 
 0.721
ENSPREP00000002982
Troponin I2, fast skeletal type.
   
 
 0.721
LOC103465646
Troponin I2, fast skeletal type.
   
 
 0.721
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.