STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000004463Uncharacterized protein. (133 aa)    
Predicted Functional Partners:
iqcb1
Uncharacterized protein.
   
 0.953
cep76
Centrosomal protein 76.
    
 0.915
ENSPREP00000010642
Uncharacterized protein.
    
 0.891
ccp110
Uncharacterized protein.
    
 0.891
pcm1
Pericentriolar material 1.
   
 
 0.883
CEP97
Centrosomal protein 97.
    
 0.860
cep131
Centrosomal protein 131.
   
 0.856
cep135
Centrosomal protein 135.
   
 0.760
lap3
Leucine aminopeptidase 3.
    
 0.749
CEP164
Centrosomal protein 164.
   
 0.735
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.