STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cfap36Cilia and flagella associated protein 36. (353 aa)    
Predicted Functional Partners:
LOC103481790
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
 
 0.850
LOC103461390
Uncharacterized protein.
   
 
 0.850
LOC103473803
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
 
 0.850
zcchc17
Zinc finger, CCHC domain containing 17.
      
 0.742
IWS1
Interacts with SUPT6H, CTD assembly factor 1.
      
 0.740
LOC103464463
Coiled-coil domain containing 114.
      
 0.726
ENSPREP00000017751
Dynein_attach_N domain-containing protein.
      
 0.682
LOC103471268
ADP ribosylation factor like GTPase 3, like 2; Belongs to the small GTPase superfamily. Arf family.
   
 
 0.681
cnot10
CCR4-NOT transcription complex, subunit 10.
      
 0.670
mks1
MKS transition zone complex subunit 1.
      
 0.586
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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