STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103460562Uncharacterized protein. (522 aa)    
Predicted Functional Partners:
QKI
QKI, KH domain containing, RNA binding 2.
   
 
 0.820
LOC103458862
QKI, KH domain containing, RNA binding a.
   
 
 0.820
PUF60
Poly-U binding splicing factor b.
   
 
 0.797
sumf2
Sulfatase modifying factor 2.
    
   0.743
khsrp
KH-type splicing regulatory protein.
   
   0.729
fubp1
Far upstream element (FUSE) binding protein 1.
   
   0.729
khdc4
Uncharacterized protein.
      
 0.599
hnrnpm
Heterogeneous nuclear ribonucleoprotein M.
   
 
 0.591
dazap1
DAZ associated protein 1.
   
 
 0.588
exosc2
Exosome component 2.
   
  0.558
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.