STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
s100pbpUncharacterized protein. (475 aa)    
Predicted Functional Partners:
fam89a
Family with sequence similarity 89 member A.
      
 0.678
s100z
Protein S100; Belongs to the S-100 family.
      
 0.648
jmjd6
Jumonji domain containing 6, arginine demethylase and lysine hydroxylase.
      
 0.595
upb1
Ureidopropionase, beta.
      
 0.503
ENSPREP00000024181
Pogo transposable element derived with ZNF domain a.
  
    0.444
LOC103479053
Uncharacterized protein.
  
     0.438
LOC103472624
Jacalin-type lectin domain-containing protein.
      
 0.407
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.