STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
psma5Proteasome subunit alpha type. (253 aa)    
Predicted Functional Partners:
psmb3
Proteasome subunit beta.
   
 0.999
psma3
Proteasome subunit alpha type.
  
0.999
psma1
Proteasome endopeptidase complex.
   
0.999
LOC103479568
Proteasome subunit alpha type.
  
0.999
psma4
Proteasome subunit alpha type.
  
0.999
psmb1
Proteasome subunit beta.
   
 0.999
psmb2
Proteasome subunit beta.
   
 0.999
psma2
Proteasome endopeptidase complex.
  
0.999
psmb4
Proteasome subunit beta; Belongs to the peptidase T1B family.
   
 0.999
psmc4
Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family.
  
 0.999
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.