STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103459886TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (253 aa)    
Predicted Functional Partners:
Taf12
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 0.999
taf11
TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 0.999
taf2
TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.999
tada3
Transcriptional adaptor 3 (NGG1 homolog, yeast)-like.
    
 0.999
taf10
TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 0.999
taf8
TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 0.999
taf6
TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.999
tada2b
Transcriptional adapter.
    
 0.998
taf13
TATA-box binding protein associated factor 13.
   
 0.996
taf3
TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto.
    
 0.995
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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