STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103458650Oligodendrocyte transcription factor 4. (256 aa)    
Predicted Functional Partners:
LOC103458615
NK2 homeobox 2a.
   
 0.608
mbp
Myelin basic protein b.
   
  
 0.516
CNP
2',3'-cyclic nucleotide 3' phosphodiesterase.
      
 0.491
nes
IF rod domain-containing protein; Belongs to the intermediate filament family.
      
 0.490
gbx2
Gastrulation brain homeobox 2.
   
 0.415
mnx1
Motor neuron and pancreas homeobox 1.
   
 0.412
tbx20
T-box transcription factor 20.
    
 
 0.412
rfx4
Regulatory factor X, 4.
   
  
 0.411
irx3
Iroquois homeobox 3a.
    
 
 0.405
dbx2
Homeobox domain-containing protein.
   
  
 0.404
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.