STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ptprgCarbonic anhydrase XVI b. (1383 aa)    
Predicted Functional Partners:
lum
Lumican.
    
 0.913
GRIN3A
Glutamate ionotropic receptor NMDA type subunit 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
    
 
 0.848
PTPN14
Protein tyrosine phosphatase non-receptor type 14.
    
 0.814
htr5a
5-hydroxytryptamine (serotonin) receptor 5A, genome duplicate b.
      
 0.758
spry4
Sprouty homolog 4 (Drosophila).
    
 0.748
nin
Ninein (GSK3B interacting protein).
   
  
 0.711
ptpre
Receptor-type tyrosine-protein phosphatase.
   
 0.692
LOC103476767
Receptor-type tyrosine-protein phosphatase.
   
 0.692
cntn2
Contactin 2.
    
 
 0.679
ptpn21
Protein tyrosine phosphatase non-receptor type 21.
    
 0.652
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.