STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000004615AA_permease domain-containing protein. (435 aa)    
Predicted Functional Partners:
map3k7cl
Map3k7 C-terminal like.
    
 0.488
pask
PAS domain containing serine/threonine kinase.
    
 0.471
LOC103480133
Serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1; Belongs to the serpin family.
   
 
 0.459
tm7sf3
Transmembrane 7 superfamily member 3.
      
 0.459
gigyf2
GRB10 interacting GYF protein 2.
      
 0.440
Gigyf1
Uncharacterized protein.
      
 0.440
ENSPREP00000020943
ARS2 domain-containing protein.
      
 0.414
srrt
Serrate RNA effector molecule homolog (Arabidopsis).
      
 0.414
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.