STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000004629Syndecan domain-containing protein. (79 aa)    
Predicted Functional Partners:
LOC103475843
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
 0.777
cask
Uncharacterized protein; Belongs to the MAGUK family.
   
 0.777
nlgn1
Neuroligin 1.
   
 0.677
nlgn4x
Neuroligin 4 X-linked a.
   
 0.627
ENSPREP00000009542
Leucine rich repeat transmembrane neuronal 2.
    
 0.617
LOC103467387
Leucine rich repeat transmembrane neuronal 1.
   
 0.614
LOC103471143
COesterase domain-containing protein.
   
 0.600
ENSPREP00000010128
Neuroligin 3a.
   
 0.600
LOC103475751
Neuroligin 3b.
   
 0.600
LOC103475868
Neuroligin 2b.
   
 0.591
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.