STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000004637Uncharacterized protein. (473 aa)    
Predicted Functional Partners:
LOC103475178
Ig_4 domain-containing protein.
   
 0.827
cd3e
Ig_4 domain-containing protein.
   
 0.827
LOC103457799
Uncharacterized protein.
   
 0.825
syk
Tyrosine-protein kinase.
   
 0.572
LOC103468233
Tyrosine-protein kinase.
   
 0.572
LOC103465012
Ig-like domain-containing protein.
   
 0.572
LOC103470832
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.467
ndufab1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.450
asf1b
Anti-silencing function 1Ba histone chaperone.
    
 0.428
LOC103468786
Anti-silencing function 1Ba histone chaperone.
    
 0.428
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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