STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fmr1Fragile X mental retardation 1. (273 aa)    
Predicted Functional Partners:
LOC103461055
Fragile X mental retardation 1.
 
     0.931
tdrd3
Tudor domain containing 3.
    
 
 0.920
nufip2
Nuclear FMR1 interacting protein 2.
   
 
 0.918
LOC103463911
Cytoplasmic FMR1 interacting protein 1.
    
 
 0.837
LOC103470899
Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.
    
 
 0.817
LOC103479027
SERPINE1 mRNA binding protein 1b.
   
 
 0.793
LOC103463733
SERPINE1 mRNA binding protein 1a.
   
 
 0.793
LOC103480164
Fragile X mental retardation, autosomal homolog 2.
   
   0.767
fxr1
Fragile X mental retardation, autosomal homolog 1.
   
   0.767
caprin1
Cell cycle associated protein 1b.
   
 
 0.724
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.