STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
clg17h7orf26Zgc:56409. (450 aa)    
Predicted Functional Partners:
ints5
Integrator complex subunit 5.
   
 
 0.903
ints3
Integrator complex subunit 3.
    
 
 0.900
ints1
Integrator complex subunit 1.
    
 
 0.899
ints7
Integrator complex subunit 7.
    
 
 0.890
ints13
Integrator complex subunit 13.
    
 
 0.859
ints10
Integrator complex subunit 10.
    
 
 0.814
ENSPREP00000026079
Integrator complex subunit 4.
    
 
 0.796
ints2
Integrator complex subunit 2.
    
 
 0.697
ints9
Integrator complex subunit 9.
    
 
 0.566
nelfb
Negative elongation factor complex member B.
   
   0.550
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.