STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000004657Amyloid beta (A4) precursor protein-binding, family B, member 3. (432 aa)    
Predicted Functional Partners:
ankrd6
Ankyrin repeat domain 6.
    
 0.843
app
Amyloid beta (A4) precursor protein a.
    
 0.733
LOC103459816
Amyloid beta (A4) precursor protein b.
    
 0.724
sh3pxd2b
SH3 and PX domains 2B.
     
 0.648
aplp1
Amyloid beta (A4) precursor-like protein 1.
    
 0.631
scaf1
SR-related CTD-associated factor 1.
    
 
 0.607
spcs3
Signal peptidase complex subunit 3.
    
 
 0.602
LOC103465559
Family with sequence similarity 83 member D.
   
 
 0.601
dlgap5
Discs, large (Drosophila) homolog-associated protein 5.
   
 0.578
ENSPREP00000015401
CENP-F_N domain-containing protein.
   
 
 0.570
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.