STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
unc45bUnc-45 myosin chaperone B. (929 aa)    
Predicted Functional Partners:
LOC103470120
SET and MYND domain containing 1b.
   
  
 0.879
LOC103457917
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.
   
 
 0.785
HSP90AA1
Heat shock protein 90 alpha family class A member 1.
   
 
 0.785
hsp90ab1
Heat shock protein 90, alpha (cytosolic), class B member 1.
   
 
 0.767
ube4b
Ubiquitination factor E4B, UFD2 homolog (S. cerevisiae).
   
 
 0.753
ube4a
Ubiquitination factor E4A (UFD2 homolog, yeast).
   
 
 0.753
cse1l
CSE1 chromosome segregation 1-like (yeast).
   
   0.663
smyd1
SET and MYND domain containing 1a.
   
  
 0.649
csnk1a1
Casein kinase 1, alpha 1; Belongs to the protein kinase superfamily.
    
   0.643
chordc1
Cysteine and histidine-rich domain (CHORD) containing 1b.
   
  
 0.639
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: medium (42%) [HD]