STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103457519Uncharacterized protein. (646 aa)    
Predicted Functional Partners:
LOC103457523
Si:dkey-17e16.9.
  
  
 
0.931
LOC103480141
Arachidonate 12-lipoxygenase.
  
  
 
0.924
LOC103457522
Si:dkey-17e16.9.
  
  
 
0.901
GPX4
Glutathione peroxidase 4.
     
 0.901
LOC103479268
Glutathione peroxidase 4b.
     
 0.901
LOC103464872
MAPK activated protein kinase 2a; Belongs to the protein kinase superfamily.
     
  0.517
LOC103476385
NIPA like domain containing 4.
      
 0.480
alox5ap
Arachidonate 5-lipoxygenase-activating protein.
   
 
 0.458
mysm1
Myb-like, SWIRM and MPN domains 1.
    
 0.434
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.