STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FCGBPSi:dkey-65b12.6. (2967 aa)    
Predicted Functional Partners:
LOC103481796
NIDO domain-containing protein.
 
  
 0.613
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.608
LOC103461037
RAN binding protein 2.
   
  0.549
b4gat1
Beta-1,4-glucuronyltransferase 1.
      
 0.504
park7
Parkinson protein 7.
      
 0.489
LOC103471920
Anterior gradient 2.
   
 
 0.467
asf1b
Anti-silencing function 1Ba histone chaperone.
    
 0.432
LOC103468786
Anti-silencing function 1Ba histone chaperone.
    
 0.432
ENSPREP00000005901
ShKT domain-containing protein; Belongs to the CRISP family.
      
 0.405
ENSPREP00000010777
SCP domain-containing protein; Belongs to the CRISP family.
      
 0.405
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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