STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rap1gapRAP1 GTPase activating protein. (719 aa)    
Predicted Functional Partners:
LOC103467749
Uncharacterized protein.
    
 0.751
rap1b
Uncharacterized protein.
    
 0.751
LOC103464617
RAP1A, member of RAS oncogene family b.
    
 0.751
prkar2b
Protein kinase cAMP-dependent type II regulatory subunit beta.
     
 0.614
LOC103458407
Rap guanine nucleotide exchange factor (GEF) 4.
   
 0.583
LOC103467797
Rap guanine nucleotide exchange factor (GEF) 3.
   
 0.557
LOC103463144
Uncharacterized protein.
    
 0.555
ENSPREP00000004060
Uncharacterized protein.
    
 0.555
RAP2A
RAP2A, member of RAS oncogene family.
    
 0.555
ENSPREP00000012815
RAP2C, member of RAS oncogene family.
    
 0.555
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.