STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103462228Synapse associated protein 1. (363 aa)    
Predicted Functional Partners:
pin1
Peptidyl-prolyl cis-trans isomerase.
    
   0.904
heca
Hdc homolog, cell cycle regulator.
      
 0.578
noc4l
Nucleolar complex associated 4 homolog.
      
 0.565
psmb4
Proteasome subunit beta; Belongs to the peptidase T1B family.
    
   0.560
gnb1l
Guanine nucleotide binding protein (G protein), beta polypeptide 1-like.
      
 0.503
vipas39
VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog.
   
  
 0.491
etf1
Eukaryotic translation termination factor 1b.
   
 
 0.479
eif2s3
Eukaryotic translation initiation factor 2, subunit 3 gamma.
   
  
 0.459
REPS2
RALBP1 associated Eps domain containing 2.
      
 0.443
Reps2
Uncharacterized protein.
      
 0.443
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.