STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC39A3Solute carrier family 39 member 3. (207 aa)    
Predicted Functional Partners:
TOMM7
Translocase of outer mitochondrial membrane 7.
    
 
 0.632
LOC103465699
SAMM50 sorting and assembly machinery component.
    
 
 0.573
LOC103459709
Sorting and assembly machinery component 50 homolog, like.
    
 
 0.573
SLC39A11
Solute carrier family 39 member 11.
   
 0.570
mtx3
Metaxin.
   
 
 0.556
LOC103477526
Metaxin 1a.
   
 
 0.556
slc39a7
Solute carrier family 39 member 7.
   
 0.549
ENSPREP00000023296
Uncharacterized protein.
    
 
 0.535
Slc39a12
Uncharacterized protein.
   
 0.533
Slc39a4
Solute carrier family 39 member 4.
   
 0.533
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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