STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc49a4Solute carrier family 49 member 4. (465 aa)    
Predicted Functional Partners:
iqck
Uncharacterized protein.
      
 0.654
Fitm2
Fat storage inducing transmembrane protein 2.
      
 0.576
slc25a26
Solute carrier family 25 member 26; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.529
hspbap1
Hspb associated protein 1.
      
 0.503
cep162
Uncharacterized protein.
      
 0.486
rab20
RAB20, member RAS oncogene family.
      
 0.470
LOC103465255
Von Hippel-Lindau tumor suppressor.
      
 0.463
cldnd1
Claudin domain containing 1a.
  
   
 0.452
slc37a4
Solute carrier family 37 member 4a.
   
  
 0.422
LOC103476137
Solute carrier family 37 member 4b.
   
  
 0.422
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.