STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103462227Phosphatase, orphan 2. (244 aa)    
Predicted Functional Partners:
pnpo
Pyridoxamine 5'-phosphate oxidase.
     
 0.915
LOC103476575
Pyridoxal (pyridoxine, vitamin B6) kinase b.
     
 0.901
LOC103460921
Pyridoxal (pyridoxine, vitamin B6) kinase a.
     
 0.901
pdxp
Pyridoxal (pyridoxine, vitamin B6) phosphatase; Belongs to the HAD-like hydrolase superfamily.
     
 0.900
aox1
Uncharacterized protein.
     
  0.900
IWS1
Interacts with SUPT6H, CTD assembly factor 1.
      
 0.578
pald1
Phosphatase domain containing paladin 1a.
      
 0.521
gmnc
Uncharacterized protein.
      
 0.503
Ostn
Uncharacterized protein.
      
 0.473
cdipt
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
   
  
 0.462
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.