STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
vdac1Voltage-dependent anion channel 1. (258 aa)    
Predicted Functional Partners:
ENSPREP00000020277
RBR-type E3 ubiquitin transferase.
    
 0.991
slc25a4
Solute carrier family 25 member 4; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 0.974
slc25a5
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 0.974
LOC103471639
Solute carrier family 25 member 6; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 0.974
LOC103475848
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 0.974
VDAC2
Voltage dependent anion channel 2.
  
0.965
LOC103473231
Zgc:56235.
  
 
0.965
vdac3
Voltage-dependent anion channel 3.
  
 
0.964
LOC103476817
Voltage-dependent anion channel 2.
  
0.964
BAX
BCL2 associated X, apoptosis regulator.
    
 
 0.953
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.