STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103477738Zgc:66024. (300 aa)    
Predicted Functional Partners:
ppt1
Palmitoyl-protein thioesterase 1 (ceroid-lipofuscinosis, neuronal 1, infantile).
     
0.929
mecr
Mitochondrial trans-2-enoyl-CoA reductase.
   
 
 0.905
ppt2
Palmitoyl-protein thioesterase 2.
  
  
 
0.902
LOC103475331
AMP-binding domain-containing protein.
   
 
 0.682
acsl1
Acyl-CoA synthetase long chain family member 1a.
   
 
 0.681
acsl3
Uncharacterized protein.
   
 
 0.681
LOC103479395
Acyl-CoA synthetase long chain family member 3b.
   
 
 0.681
LOC103470977
Acyl-CoA synthetase long chain family member 4a.
   
 
 0.671
ACSL1
Acyl-CoA synthetase long chain family member 1.
   
 
 0.660
ENSPREP00000016743
Uncharacterized protein.
   
 
 0.651
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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