STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem231Transmembrane protein 231. (321 aa)    
Predicted Functional Partners:
B9d2
Uncharacterized protein.
   
 
 0.848
b9d1
B9 protein domain 1.
   
 
 0.827
cc2d2a
Coiled-coil and C2 domain containing 2A.
    
 
 0.703
tctn1
DUF1619 domain-containing protein.
   
 
 0.699
tmem67
Transmembrane protein 67.
   
  
 0.673
mks1
MKS transition zone complex subunit 1.
    
 
 0.671
nphp1
Nephronophthisis 1.
   
  
 0.657
LOC103471469
Transmembrane protein 216.
   
  
 0.652
tctn2
Tectonic family member 2.
    
 
 0.646
rpgrip1l
RPGRIP1 like.
      
 0.636
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.