STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
snx13Sorting nexin 13. (954 aa)    
Predicted Functional Partners:
tspan13
Tetraspanin 13a; Belongs to the tetraspanin (TM4SF) family.
    
 
 0.920
LOC103468804
Fructosamine 3 kinase related protein; Belongs to the fructosamine kinase family.
 
 
    0.820
ENSPREP00000017474
Uncharacterized protein.
   
 
 0.798
SNX14
Sorting nexin 14.
   
 
 0.798
ankmy2
Ankyrin repeat and MYND domain containing 2a.
    
 
 0.783
LOC103468044
Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family.
    
   0.730
LOC103464693
Tetraspanin.
    
   0.730
CAAP1
Caspase activity and apoptosis inhibitor 1.
      
 0.670
atp13a1
Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily.
      
 0.651
ankrd46
Ankyrin repeat domain 46b.
    
 0.625
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.