STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mblac1Metallo-beta-lactamase domain containing 1. (216 aa)    
Predicted Functional Partners:
elac2
ElaC ribonuclease Z 2.
      
 0.622
traip
TRAF-interacting protein.
      
 0.601
fam214a
Family with sequence similarity 214 member A.
      
 0.582
ISYNA1
Inositol-3-phosphate synthase 1.
      
 0.570
kbtbd4
Kelch repeat and BTB (POZ) domain containing 4.
      
 0.563
elac1
ElaC ribonuclease Z 1.
      
 0.563
tatdn3
TatD DNase domain containing 3.
      
 0.560
TATDN3
TatD DNase domain containing 3.
      
 0.560
aurkaip1
Aurora kinase A interacting protein 1.
      
 0.452
bcl7b
BAF chromatin remodeling complex subunit BCL7B b.
    
   0.445
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.