Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000004849G_PROTEIN_RECEP_F3_4 domain-containing protein. (835 aa)    
Predicted Functional Partners:
ENSPREP00000014094
NDK domain-containing protein.
    
   0.524
ENSPREP00000027150
Uncharacterized protein.
    
   0.445
gnat1
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
    
 0.433
LOC103467179
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
    
 0.433
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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