STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
six2SIX homeobox 2a. (290 aa)    
Predicted Functional Partners:
eya1
Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family.
   
 0.853
eya4
Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family.
   
 0.691
LOC103464861
Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family.
   
 0.691
ENSPREP00000014560
Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family.
   
 0.680
LOC103476847
Paired box 2a.
    
 0.637
foxd1
Forkhead box D1.
      
 0.582
cited1
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1.
      
 0.572
LOC103478373
ADAM metallopeptidase with thrombospondin type 1 motif, 16.
   
  
 0.545
CDH6
Cadherin 6; Cadherins are calcium-dependent cell adhesion proteins.
   
  
 0.523
itga8
Integrin, alpha 8; Belongs to the integrin alpha chain family.
      
 0.514
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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