STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nphs1NPHS1 adhesion molecule, nephrin. (1242 aa)    
Predicted Functional Partners:
nphs2
NPHS2 stomatin family member, podocin.
   
 0.952
LOC103479503
Kirre like nephrin family adhesion molecule 1b.
   
 0.908
LOC103480168
Kirre like nephrin family adhesion molecule 1a.
   
 0.908
kirrel2
Kirre like nephrin family adhesion molecule 3, like.
   
 0.908
KIRREL3
Kirre like nephrin family adhesion molecule 3.
   
 0.908
CD2AP
CD2 associated protein.
    
 0.878
sh3d21
SH3 domain containing 21.
    
 0.878
sh3kbp1
SH3-domain kinase binding protein 1.
    
 0.878
plce1
Phospholipase C, epsilon 1.
      
 0.765
nck2
Cytoplasmic protein.
    
 0.755
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.