STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103478545Solute carrier family 15 member 2. (681 aa)    
Predicted Functional Partners:
CXorf21
Chromosome X open reading frame 21.
    
 0.743
ENSPREP00000009332
Solute carrier family 30 member 5.
      
 0.632
slc33a1
Solute carrier family 33 member 1.
   
 
 0.612
ecm1
Uncharacterized protein.
      
 0.594
ddx52
DEAD (Asp-Glu-Ala-Asp) box polypeptide 52.
      
 0.587
slc39a13
Solute carrier family 39 member 13.
    
 
 0.587
bms1
BMS1 ribosome biogenesis factor.
      
 0.551
pola1
DNA polymerase.
      
 0.525
LOC103468818
Charged multivesicular body protein 6a.
    
   0.498
chmp6
Charged multivesicular body protein 6.
    
   0.498
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.