STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103478550Si:dkey-91i10.3; Belongs to the cytochrome P450 family. (534 aa)    
Predicted Functional Partners:
LOC103460470
Cytochrome P450, family 7, subfamily B, polypeptide 1; Belongs to the cytochrome P450 family.
  
 
0.942
LOC103479251
Cytochrome P450, family 7, subfamily A, polypeptide 1; Belongs to the cytochrome P450 family.
  
0.939
LOC103457823
Uncharacterized protein.
  
 
0.928
LOC103457824
Uncharacterized protein.
  
 
0.927
ENSPREP00000011149
Cytochrome P450, family 8, subfamily B, polypeptide 2; Belongs to the cytochrome P450 family.
    
 0.910
dhcr7
7-dehydrocholesterol reductase.
    
 0.857
dhcr24
24-dehydrocholesterol reductase.
    
 0.825
LOC103464407
O-acyltransferase.
   
 
 0.810
soat1
O-acyltransferase.
   
 
 0.810
lipa
Lipase; Belongs to the AB hydrolase superfamily. Lipase family.
  
  0.803
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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