Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
adgra1Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family. (1381 aa)    
Predicted Functional Partners:
LOC103462232
Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.532
LOC103469561
Uncharacterized protein.
      
 0.525
otud7a
OTU deubiquitinase 7A.
      
 0.503
LOC103475867
Lysine (K)-specific demethylase 6B, b.
    
 
 0.440
kdm6b
Lysine (K)-specific demethylase 6B, a.
    
 
 0.440
LOC103474391
LisH domain-containing protein.
    
 0.421
glrx5
Glutaredoxin 5 homolog (S. cerevisiae).
    
 0.414
llgl2
LLGL scribble cell polarity complex component 2.
    
 
 0.411
nr1i2
Nuclear receptor subfamily 1, group I, member 2.
    
 
 0.410
znf511
Zinc finger protein 511.
      
 0.408
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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