Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
kirrel2Kirre like nephrin family adhesion molecule 3, like. (761 aa)    
Predicted Functional Partners:
nphs1
NPHS1 adhesion molecule, nephrin.
   
 0.908
LOC103470355
Solute carrier family 2 member 11b; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
   
  
 0.671
ca10
Carbonic anhydrase Xa; Belongs to the alpha-carbonic anhydrase family.
      
 0.668
ptn
Pleiotrophin.
      
 0.668
Tspan10
Tetraspanin 10; Belongs to the tetraspanin (TM4SF) family.
     
 0.667
dct
Dopachrome tautomerase.
    
 0.611
nck2
Cytoplasmic protein.
    
 0.605
nck1
Cytoplasmic protein.
    
 0.605
pmel
Premelanosome protein a.
      
 0.602
slc45a2
Solute carrier family 45 member 2.
   
  
 0.596
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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