STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000004948SCY domain-containing protein. (87 aa)    
Predicted Functional Partners:
LOC103474633
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
   
 0.974
LOC103461814
Chemokine (C-X-C motif) receptor 2; Belongs to the G-protein coupled receptor 1 family.
   
 0.974
ENSPREP00000030123
Chemokine (C-X-C motif) receptor 1; Belongs to the G-protein coupled receptor 1 family.
   
 0.974
LOC103469546
Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family.
   
 0.958
LOC103475941
C-X-C motif chemokine.
   
 0.944
NFKB1
Nuclear factor kappa B subunit 1.
   
 0.923
ENSPREP00000002835
Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family.
   
 0.915
LOC103480184
V-rel avian reticuloendotheliosis viral oncogene homolog A.
   
 0.908
jun
BZIP domain-containing protein; Belongs to the bZIP family.
   
  0.900
LOC103464854
Chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1); Belongs to the intercrine alpha (chemokine CxC) family.
   
 0.732
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.