STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rassf9Ras association domain family member 9. (447 aa)    
Predicted Functional Partners:
pam
Peptidylglycine alpha-amidating monooxygenase.
    
 
 0.804
spata2
Spermatogenesis associated 2.
      
 0.733
mrpl18
Mitochondrial ribosomal protein L18.
      
 0.696
trpt1
tRNA phosphotransferase 1.
      
 0.672
cnksr1
Connector enhancer of kinase suppressor of Ras 1.
      
 0.670
LOC103458854
ArfGAP with SH3 domain, ankyrin repeat and PH domain 3.
      
 0.655
clg6h12orf29
Zgc:103499.
      
 0.632
LOC103471126
RUN and FYVE domain containing 1.
      
 0.618
LOC103474013
Ras association domain family member 6.
   
  
 0.595
LOC103462782
GC-rich sequence DNA-binding factor 2.
   
  
 0.591
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.