STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gigyf2GRB10 interacting GYF protein 2. (1307 aa)    
Predicted Functional Partners:
znf598
Zinc finger protein 598.
   
 
 0.945
Eif4e2
Eukaryotic translation initiation factor 4E family member 2; Belongs to the eukaryotic initiation factor 4E family.
    
 
 0.900
ENSPREP00000013186
Uncharacterized protein.
    
 
 0.797
ddx6
DEAD (Asp-Glu-Ala-Asp) box helicase 6; Belongs to the DEAD box helicase family.
    
 
 0.797
dis3l
DIS3 like exosome 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.
   
 
 0.779
LOC103469285
Trinucleotide repeat containing adaptor 6C1.
   
 
 0.753
LOC103468018
Trinucleotide repeat containing adaptor 6C2.
   
 
 0.753
tnrc6a
Trinucleotide repeat containing adaptor 6A.
   
 
 0.753
cnot1
CCR4-NOT transcription complex, subunit 1.
   
 
 0.686
edf1
Endothelial differentiation-related factor 1.
      
 0.668
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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