STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dcxrDicarbonyl/L-xylulose reductase. (224 aa)    
Predicted Functional Partners:
tmem231
Transmembrane protein 231.
      
 0.481
miga2
Mitoguardin 2.
      
 0.470
rnf217
RBR-type E3 ubiquitin transferase.
      
 0.470
slc35e3
Solute carrier family 35 member E3.
      
 0.470
foxred1
FAD-dependent oxidoreductase domain containing 1.
      
 0.467
LOC103464679
Nuclear receptor coactivator 5.
      
 0.463
dnajc24
Uncharacterized protein.
    
 
 0.453
snx25
Sorting nexin 25.
      
 0.440
ift57
Intraflagellar transport 57 homolog (Chlamydomonas).
      
 0.433
pms1
PMS1 homolog 1, mismatch repair system component.
      
 0.408
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.