STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000004981Uncharacterized protein. (137 aa)    
Predicted Functional Partners:
ENSPREP00000005025
Prolyl endopeptidase like.
      
 0.654
slc3a1
Solute carrier family 3 member 1.
      
 0.601
CAMKMT
Calmodulin-lysine N-methyltransferase.
 
      0.592
kin
Kin17 DNA and RNA binding protein.
      
 0.588
mettl18
Methyltransferase like 18.
      
 0.578
etfbkmt
Electron transfer flavoprotein subunit beta lysine methyltransferase.
      
 0.574
LOC103472525
Neuralized E3 ubiquitin protein ligase 1Aa.
    
   0.564
neurl1b
Neuralized E3 ubiquitin protein ligase 1B.
    
   0.564
ENSPREP00000010922
NHR domain-containing protein.
    
   0.564
LOC103476780
Uncharacterized protein.
    
   0.564
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.