STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cdca7lCell division cycle associated 7b. (397 aa)    
Predicted Functional Partners:
rad17
RAD17 checkpoint clamp loader component.
   
 0.889
hus1
Checkpoint protein; Belongs to the HUS1 family.
    
 0.887
rad1
RAD1 homolog (S. pombe).
    
 0.887
rfc2
Replication factor C (activator 1) 2.
   
 0.868
rfc4
Replication factor C (activator 1) 4.
   
 0.867
slf1
SMC5-SMC6 complex localization factor 1.
    
 0.858
atm
Non-specific serine/threonine protein kinase.
    
 0.858
rfc3
Replication factor C (activator 1) 3.
   
 0.838
rfc5
Replication factor C (activator 1) 5.
   
 0.837
tipin
TIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family.
   
 0.797
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (26%) [HD]