STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM124AFamily with sequence similarity 124 member A. (533 aa)    
Predicted Functional Partners:
st6galnac6
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
    
 
 0.759
tbc1d2b
TBC1 domain family, member 2B.
      
 0.730
habp2
Uncharacterized protein.
   
 0.688
neurl4
Neuralized E3 ubiquitin protein ligase 4.
      
 0.597
adgrl2
Adhesion G protein-coupled receptor L2a; Belongs to the G-protein coupled receptor 2 family.
      
 0.595
Lrrc41
Uncharacterized protein.
  
   
 0.594
LOC103461416
Serine--pyruvate aminotransferase.
   
  
 0.575
pdcd10
Programmed cell death 10b.
      
 0.553
HGFAC
HGF activator.
   
 0.546
ints6
Integrator complex subunit 6.
      
 0.503
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.