STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdk10Cyclin-dependent kinase 10; Belongs to the protein kinase superfamily. (363 aa)    
Predicted Functional Partners:
ccnl1
Cyclin L1a; Belongs to the cyclin family.
   
 
 0.668
ccnc
Cyclin C; Belongs to the cyclin family.
     
 0.643
cenpj
Centromere protein J.
   
 0.590
cep135
Centrosomal protein 135.
    
 0.586
nek2
NIMA-related kinase 2.
  
  
 
0.583
cep63
Centrosomal protein 63.
     
 0.569
haus8
Uncharacterized protein.
     
 0.564
cep78
Centrosomal protein 78.
     
 0.561
mapre1
Microtubule-associated protein, RP/EB family, member 1b.
   
 
  0.560
cep131
Centrosomal protein 131.
     
 0.557
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.