STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc29a3Solute carrier family 29 member 3. (465 aa)    
Predicted Functional Partners:
pcbd1
Pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha.
   
  
 0.536
ENSPREP00000001090
Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family.
   
 
 0.532
unc5b
Unc-5 netrin receptor B.
      
 0.530
ostm1
Osteoclastogenesis associated transmembrane protein 1.
   
  
 0.505
adgrl4
Adhesion G protein-coupled receptor L4; Belongs to the G-protein coupled receptor 2 family.
    
   0.455
clcn7
Chloride channel protein.
      
 0.406
tbrg1
Transforming growth factor beta regulator 1.
      
 0.401
ano5
Anoctamin.
      
 0.401
LOC103470355
Solute carrier family 2 member 11b; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
    
 
 0.400
sgpl1
Sphingosine-1-phosphate lyase 1.
      
 0.400
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.