STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ikIK cytokine. (492 aa)    
Predicted Functional Partners:
SMU1
SMU1 DNA replication regulator and spliceosomal factor.
   
 0.993
prpf6
PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae).
   
 0.989
mfap1
Microfibril associated protein 1.
   
 0.975
smu1
SMU1 DNA replication regulator and spliceosomal factor b.
   
 0.962
xab2
XPA binding protein 2.
   
  0.952
ZNF830
Zinc finger protein 830.
    
  0.948
rnf113a
Ring finger protein 113A.
    
  0.948
snip1
Smad nuclear interacting protein.
    
   0.937
LOC103481302
FRA10A associated CGG repeat 1.
   
   0.924
prpf3
PRP3 pre-mRNA processing factor 3 homolog (yeast).
   
   0.901
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.