Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000005062Uncharacterized protein. (375 aa)    
Predicted Functional Partners:
LOC108166784
Sperm associated antigen 8.
    
   0.744
arx
Aristaless related homeobox a.
   
  0.645
LOC103464057
Sec1 family domain containing 2; Belongs to the STXBP/unc-18/SEC1 family.
      
 0.601
arsg
Arylsulfatase G.
    
 
 0.539
ubxn7
UBX domain protein 7.
   
 0.516
zbtb1
Zinc finger and BTB domain containing 1.
      
 0.503
tbx21
T-box transcription factor 21.
    
 
 0.432
LOC103466072
ERGIC and golgi 2.
      
 0.430
LOC103459111
Uncharacterized protein.
      
 0.430
mysm1
Myb-like, SWIRM and MPN domains 1.
    
  0.424
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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