STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pelp1Proline, glutamate and leucine rich protein 1. (1272 aa)    
Predicted Functional Partners:
wdr18
WD repeat domain 18.
   
 0.983
tex10
Testis expressed 10.
   
 0.960
nol9
Nucleolar protein 9.
   
 0.909
LOC103480126
SUMO specific peptidase 3b.
    
 0.715
ENSPREP00000008673
ULP_PROTEASE domain-containing protein.
    
 0.715
LOC103468251
SUMO specific peptidase 5.
    
 0.715
crebzf
CREB/ATF bZIP transcription factor.
    
 0.696
ENSPREP00000008252
Uncharacterized protein.
    
 0.696
LOC103461358
Uncharacterized protein.
    
 0.696
pes1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.639
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (28%) [HD]