STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pelp1Proline, glutamate and leucine rich protein 1. (1272 aa)    
Predicted Functional Partners:
wdr18
WD repeat domain 18.
   
 0.998
tex10
Testis expressed 10.
   
 0.998
nol9
Nucleolar protein 9.
   
 0.989
ENSPREP00000008673
ULP_PROTEASE domain-containing protein.
    
 0.879
LOC103468251
SUMO specific peptidase 5.
    
 0.879
crebzf
CREB/ATF bZIP transcription factor.
   
 0.874
ENSPREP00000008252
Uncharacterized protein.
   
 0.874
LOC103461358
Uncharacterized protein.
   
 0.874
pes1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.873
LOC103480126
SUMO specific peptidase 3b.
    
 0.852
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.